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IIRC, the FRPP intake came from Ford with a (rather benign) tune. I suspect you'll throw a code with one.

If clearing those drain plugs doesn't resolve the issue, check for the TSB regarding this common issue with the 05s through some of the 07s and 08s. The leak identified in the TSB drains down the inside of the front passenger kick panel where the SJB (Smart Junction Box) is located. Eventually...

I have a Brenspeed CAI and tunes; 87, 89 and 91 octane (from 2007); on my '07 GT and even the 87 octane custom tune runs circles around the stock tune. My 87 tune is a great street tune, most responsive in the lower rpm range. The 91 tune is a dog in town but excels on the track in the upper rpm...

I'd clean the TB 1 more time and, if it persists, then run a can of Seafoam thru the tank. If it STILL persists, than I'm on board with the vacuum leak, or possibly air in-leakage ahead of the TB.

Getting 5 years on a battery, especially in hotter climates, is a decent life span, like it or not. Unless you run your high power audio system with the ignition off, you don't need a higher capacity battery then stock or equivalent. With the engine running, all loads are supplied by the...

2007 GT, 44k miles.

The SJB in the 2005 thru some 2007's has been the root of many gremlins. There's a TSB on it. Are you experiencing any other electrical issues? I'd say you have a short if it was the other way around: stalling when you APPLY the brakes...

Sweet.

See my response to your same question on MF.