We had swapped the auto trans for a manual, got a used manual pcm online and got keys flashed for it. Car started but it's not running properly now. The dealer mechanic said it's running lean and it's throwing Code P2198. I checked the o2 sensors with multimeter and they seem good. They worked fine before the swap. The car feels shaky and runs like it's misfiring. The mechanic checked the air filter indicating that maybe there not enough air going in. Like mi said everything in the car was fine. I did swap the auto harness for a manual but the with my dads obd2 scanner nothing else pops up but p2198. Man I'm bummed out. Any help here I would really appreciate it.